{ "_id": "6a116961acfb0bcc41cf326b", "Package": "FRK", "Type": "Package", "Title": "Fixed Rank Kriging", "Version": "2.3.2", "Date": "2026-01-15", "Authors@R": "c(\nperson(\"Andrew\", \"Zammit-Mangion\", , \"andrewzm@gmail.com\", c(\"aut\", \"cre\")),\nperson(\"Matthew\", \"Sainsbury-Dale\", , \"msdale@uow.edu.au\", c(\"aut\")))", "Maintainer": "Andrew Zammit-Mangion ", "VignetteBuilder": "knitr", "Description": "A tool for spatial/spatio-temporal modelling and\nprediction with large datasets. The approach models the field,\nand hence the covariance function, using a set of basis\nfunctions. This fixed-rank basis-function representation\nfacilitates the modelling of big data, and the method naturally\nallows for non-stationary, anisotropic covariance functions.\nDiscretisation of the spatial domain into so-called basic areal\nunits (BAUs) facilitates the use of observations with varying\nsupport (i.e., both point-referenced and areal supports,\npotentially simultaneously), and prediction over arbitrary\nuser-specified regions. `FRK` also supports inference over\nvarious manifolds, including the 2D plane and 3D sphere, and it\nprovides helper functions to model, fit, predict, and plot with\nrelative ease. Version 2.0.0 and above also supports the\nmodelling of non-Gaussian data (e.g., Poisson, binomial,\nnegative-binomial, gamma, and inverse-Gaussian) by employing a\ngeneralised linear mixed model (GLMM) framework. Zammit-Mangion\nand Cressie describe `FRK` in a\nGaussian setting, and detail its use of basis functions and\nBAUs, while Sainsbury-Dale, Zammit-Mangion, and Cressie\n describe `FRK` in a non-Gaussian\nsetting; two vignettes are available that summarise these\npapers and provide additional examples.", "URL": "https://andrewzm.github.io/FRK/, https://github.com/andrewzm/FRK/", "BugReports": "https://github.com/andrewzm/FRK/issues/", "Additional_repositories": "https://andrewzm.github.io/dggrids-repo/", "License": "GPL (>= 2)", "NeedsCompilation": "yes", "LazyData": "true", "RoxygenNote": "7.3.2", "Encoding": "UTF-8", "Config/pak/sysreqs": "libabsl-dev cmake libgdal-dev gdal-bin libgeos-dev\nmake libicu-dev libuv1-dev libssl-dev libproj-dev\nlibsqlite3-dev libudunits2-dev", "Repository": "https://andrewzm.r-universe.dev", "Date/Publication": "2026-01-15 02:06:07 UTC", "RemoteUrl": "https://github.com/andrewzm/frk", "RemoteRef": "HEAD", "RemoteSha": "e1763ee55d46ffe2e5bfa7c5b9c63b603f581265", "Packaged": { "Date": "2026-05-23 08:34:44 UTC", "User": "root" }, "Author": "Andrew Zammit-Mangion [aut, cre],\nMatthew Sainsbury-Dale [aut]", "MD5sum": "8685747243bbbc6cbdb2a686dba96e94", "_user": "andrewzm", "_type": "src", "_file": "FRK_2.3.2.tar.gz", "_fileid": "0fb673bb4d3a2cf8833e57eac521257f1393ce8c50ee4b50373d38cac4eabbbb", "_filesize": 7078461, "_sha256": "0fb673bb4d3a2cf8833e57eac521257f1393ce8c50ee4b50373d38cac4eabbbb", "_created": "2026-05-23T08:34:44.000Z", "_published": "2026-05-23T08:46:25.358Z", "_distro": "noble", "_jobs": [ { "job": 77509780386, "time": 302, "config": "linux-devel-arm64", "r": "4.7.0", "check": "OK", "artifact": "7175698526" }, { "job": 77509780382, "time": 360, "config": "linux-devel-x86_64", "r": "4.7.0", "check": "OK", "artifact": "7175703851" }, { "job": 77509780392, "time": 339, "config": "linux-release-arm64", "r": "4.6.0", "check": "OK", "artifact": "7175701864" }, { "job": 77509780391, "time": 370, 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"data.frame" ], "fields": [ "Easting", "Northing", "Am" ], "rows": 212, "table": true, "tojson": true }, { "name": "isea3h", "title": "ISEA Aperture 3 Hexagon (ISEA3H) Discrete Global Grid", "object": "isea3h", "class": [ "data.frame" ], "fields": [ "id", "lon", "lat", "res", "centroid" ], "rows": 284208, "table": true, "tojson": true }, { "name": "MODIS_cloud_df", "title": "MODIS cloud data", "object": "MODIS_cloud_df", "class": [ "data.frame" ], "fields": [ "x", "y", "z", "z_unthresholded" ], "rows": 33750, "table": true, "tojson": true }, { "name": "NOAA_df_1990", "title": "NOAA maximum temperature data for 1990-1993", "object": "NOAA_df_1990", "class": [ "data.frame" ], "fields": [ "year", "month", "day", "z", "proc", "id", "lon", "lat" ], "rows": 196253, "table": true, "tojson": true }, { "name": "worldmap", "title": "World map", "object": "worldmap", "class": [ "data.frame" ], "fields": [ "long", "lat", "group", "order", "region", "subregion" ], "rows": 33971, "table": true, "tojson": true } ], "_help": [ { "page": "AIRS_05_2003", "title": "AIRS data for May 2003", "topics": [ "AIRS_05_2003" ] }, { "page": "Am_data", "title": "Americium soil data", "topics": [ "Am_data" ] }, { "page": "auto_basis", "title": "Automatic basis-function placement", "topics": [ "auto_basis" ] }, { "page": "auto_BAUs", "title": "Automatic BAU generation", "topics": [ "auto_BAUs" ] }, { "page": "Basis", "title": "Generic basis-function constructor", "topics": [ "Basis" ] }, { "page": "Basis-class", "title": "Basis functions", "topics": [ "Basis-class", "Basis_obj-class", "TensorP_Basis-class" ] }, { "page": "BAUs_from_points", "title": "Creates pixels around points", "topics": [ "BAUs_from_points", "BAUs_from_points,SpatialPoints-method", "BAUs_from_points,ST-method" ] }, { "page": "coef_uncertainty", "title": "Uncertainty quantification of the fixed effects", "topics": [ "coef_uncertainty" ] }, { "page": "combine_basis", "title": "Combine basis functions", "topics": [ "combine_basis", "combine_basis,Basis-method", "combine_basis,list-method" ] }, { "page": "Basis_data.frame", "title": "Basis-function data frame object", "topics": [ "$,Basis-method", "$<-,Basis-method", "as.data.frame.Basis", "as.data.frame.TensorP_Basis", "data.frame<-", "data.frame<-,Basis-method", "data.frame<-,TensorP_Basis-method", "data.frame_Basis,Basis-method" ] }, { "page": "df_to_SpatialPolygons", "title": "Convert data frame to SpatialPolygons", "topics": [ "df_to_SpatialPolygons" ] }, { "page": "dist-matrix", "title": "Distance Matrix Computation from Two Matrices", "topics": [ "dist-matrix", "distR" ] }, { "page": "distance", "title": "Compute distance", "topics": [ "distance", "distance,manifold-method", "distance,measure-method" ] }, { "page": "distances", "title": "Pre-configured distances", "topics": [ "distances", "Euclid_dist", "gc_dist", "gc_dist_time", "measure" ] }, { "page": "draw_world", "title": "Draw a map of the world with country boundaries.", "topics": [ "draw_world" ] }, { "page": "eval_basis", "title": "Evaluate basis functions", "topics": [ "eval_basis", "eval_basis,Basis,matrix-method", "eval_basis,Basis,SpatialPointsDataFrame-method", "eval_basis,Basis,SpatialPolygonsDataFrame-method", "eval_basis,Basis,STIDF-method", "eval_basis,Basis-matrix-method", "eval_basis,Basis-SpatialPointsDataFrame-method", "eval_basis,Basis-SpatialPolygonsDataFrame-method", "eval_basis,Basis-STIDF-method", "eval_basis,TensorP_Basis,matrix-method", "eval_basis,TensorP_Basis,STFDF-method", "eval_basis,TensorP_Basis,STIDF-method", "eval_basis,TensorP_Basis-matrix-method", "eval_basis,TensorP_Basis-STFDF-method", "eval_basis,TensorP_Basis-STIDF-method" ] }, { "page": "SRE", "title": "Construct SRE object, fit and predict", "topics": [ "AIC,SRE-method", "BIC,SRE-method", "coef,SRE-method", "coef_uncertainty,SRE-method", "fitted,SRE-method", "FRK", "logLik,SRE-method", "nobs,SRE-method", "predict,SRE-method", "residuals,SRE-method", "simulate", "SRE", "SRE.fit" ] }, { "page": "info_fit", "title": "Retrieve fit information for SRE model", "topics": [ "info_fit", "info_fit,SRE-method" ] }, { "page": "initialize-manifold-method", "title": "manifold", "topics": [ "initialize,manifold-method" ] }, { "page": "isea3h", "title": "ISEA Aperture 3 Hexagon (ISEA3H) Discrete Global Grid", "topics": [ "isea3h" ] }, { "page": "local_basis", "title": "Construct a set of local basis functions", "topics": [ "local_basis", "radial_basis" ] }, { "page": "loglik", "title": "(Deprecated) Retrieve log-likelihood", "topics": [ "loglik", "loglik,SRE-method" ] }, { "page": "manifold", "title": "Retrieve manifold", "topics": [ "manifold", "manifold,Basis-method", "manifold,TensorP_Basis-method" ] }, { "page": "manifold-class", "title": "manifold", "topics": [ "manifold-class", "plane-class", "real_line-class", "sphere-class", "STmanifold-class", "STplane-class", "STsphere-class" ] }, { "page": "measure-class", "title": "measure", "topics": [ "measure-class" ] }, { "page": "MODIS_cloud_df", "title": "MODIS cloud data", "topics": [ "MODIS_cloud_df" ] }, { "page": "nbasis", "title": "Number of basis functions", "topics": [ "nbasis", "nbasis,Basis_obj-method", "nbasis,SRE-method" ] }, { "page": "NOAA_df_1990", "title": "NOAA maximum temperature data for 1990-1993", "topics": [ "NOAA_df_1990" ] }, { "page": "nres", "title": "Return the number of resolutions", "topics": [ "nres", "nres,Basis-method", "nres,SRE-method", "nres,TensorP_Basis-method", "nres_basis,Basis-method", "nres_SRE,SRE-method" ] }, { "page": "observed_BAUs", "title": "Observed (or unobserved) BAUs", "topics": [ "observed_BAUs", "observed_BAUs,SRE-method", "unobserved_BAUs", "unobserved_BAUs,SRE-method" ] }, { "page": "opts_FRK", "title": "FRK options", "topics": [ "opts_FRK" ] }, { "page": "plane", "title": "plane", "topics": [ "plane" ] }, { "page": "plot", "title": "Plot predictions from FRK analysis", "topics": [ "plot", "plot,SRE,list-method", "plot,SRE,SpatialPixelsDataFrame-method", "plot,SRE,SpatialPointsDataFrame-method", "plot,SRE,SpatialPolygonsDataFrame-method", "plot,SRE,STFDF-method" ] }, { "page": "plot_spatial_or_ST", "title": "Plot a Spatial*DataFrame or STFDF object", "topics": [ "plot_spatial_or_ST", "plot_spatial_or_ST,SpatialPixelsDataFrame-method", "plot_spatial_or_ST,SpatialPointsDataFrame-method", "plot_spatial_or_ST,SpatialPolygonsDataFrame-method", "plot_spatial_or_ST,STFDF-method" ] }, { "page": "plotting-themes", "title": "Plotting themes", "topics": [ "EmptyTheme", "LinePlotTheme", "plotting-themes" ] }, { "page": "real_line", "title": "real line", "topics": [ "real_line" ] }, { "page": "remove_basis", "title": "Removes basis functions", "topics": [ "remove_basis", "remove_basis,Basis,ANY-method", "remove_basis,Basis,SpatialPolygons-method", "remove_basis,Basis-method" ] }, { "page": "show_basis", "title": "Show basis functions", "topics": [ "show_basis", "show_basis,Basis-method", 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