Package: deepspat 0.3.1

Quan Vu

deepspat: Deep Compositional Spatial Models

Deep compositional spatial models are standard spatial covariance models coupled with an injective warping function of the spatial domain. The warping function is constructed through a composition of multiple elemental injective functions in a deep-learning framework. The package implements two cases for the univariate setting; first, when these warping functions are known up to some weights that need to be estimated, and, second, when the weights in each layer are random. In the multivariate setting only the former case is available. Estimation and inference is done using `tensorflow`, which makes use of graphics processing units. For more details see Zammit-Mangion et al. (2022) <doi:10.1080/01621459.2021.1887741>, Vu et al. (2022) <doi:10.5705/ss.202020.0156>, Vu et al. (2023) <doi:10.1016/j.spasta.2023.100742>, and Shao et al. (2025) <doi:10.48550/arXiv.2505.12548>.

Authors:Andrew Zammit-Mangion [aut], Quan Vu [aut, cre], Xuanjie Shao [aut]

deepspat_0.3.1.tar.gz
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manual.pdf |manual.html
card.svg |card.png
deepspat/json (API)
NEWS

# Install 'deepspat' in R:
install.packages('deepspat', repos = c('https://andrewzm.r-universe.dev', 'https://cloud.r-project.org'))

Bug tracker:https://github.com/andrewzm/deepspat/issues

On CRAN:

Conda:

4.90 score 10 stars 128 downloads 19 exports 48 dependencies

Last updated from:0a38d2c0a7. Checks:9 OK. Indexed: yes.

TargetResultTimeFilesSyslog
linux-devel-x86_64OK188
source / vignettesOK189
linux-release-x86_64OK180
macos-release-arm64OK118
macos-oldrel-arm64OK120
windows-develOK164
windows-releaseOK112
windows-oldrelOK119
wasm-releaseOK107

Exports:AFF_1DAFF_2DAWUbisquares1Dbisquares2Ddeepspatdeepspat_bivar_GPdeepspat_GPdeepspat_MSPdeepspat_nn_GPdeepspat_nn_ST_GPdeepspat_rPPdeepspat_trivar_GPinit_learn_ratesinitvarsLFTRBF_blockset_deepspat_seedsim_data

Dependencies:backportsbase64enccliconfigdata.tabledotCall64dplyrevdfieldsgenericsglueherejsonlitekeraslatticelifecyclemagrittrmapsMatrixpillarpkgconfigpngprocessxpsR6rappdirsRColorBrewerRcppRcppTOMLreticulaterlangrprojrootrstudioapispamSpatialExtremestensorflowtfautographtfprobabilitytfrunstibbletidyselectutf8vctrsviridisLitewhiskerwithryamlzeallot

Readme and manuals

Help Manual

Help pageTopics
Affine transformation on a 1D domainAFF_1D
Affine transformation on a 2D domainAFF_2D
Axial Warping UnitAWU
Bisquare functions on a 1D domainbisquares1D
Bisquare functions on a 2D domainbisquares2D
Deep compositional spatial modelsdeepspat-package deepspat
Deep bivariate compositional spatial model for Gaussian processesdeepspat_bivar_GP
Deep compositional spatial model for Gaussian processesdeepspat_GP
Deep compositional spatial model for max-stable processesdeepspat_MSP
Deep compositional spatial model (with nearest neighbors) for Gaussian processesdeepspat_nn_GP
Deep compositional spatio-temporal model (with nearest neighbors) for Gaussian processesdeepspat_nn_ST_GP
Deep compositional spatial model for r-Pareto processesdeepspat_rPP
Deep trivariate compositional spatial model for Gaussian processesdeepspat_trivar_GP
Initialise learning ratesinit_learn_rates
Initialise weights and parametersinitvars
LFT (Möbius transformation)LFT
Deep compositional spatial modelpredict.deepspat
Deep bivariate compositional spatial modelpredict.deepspat_bivar_GP
Deep compositional spatial modelpredict.deepspat_GP
Deep compositional spatial model (with nearest neighbors)predict.deepspat_nn_GP
Deep compositional spatio-temporal model (with nearest neighbors)predict.deepspat_nn_ST_GP
Deep trivariate compositional spatial modelpredict.deepspat_trivar_GP
Radial Basis Function WarpingsRBF_block
Set TensorFlow seedset_deepspat_seed
Generate simulation data for testingsim_data
Deep compositional spatial model for max-stable processessummary.deepspat_MSP
Deep compositional spatial model for r-Pareto processessummary.deepspat_rPP